I'll do these in order.
There wasn't too much available for programming 5.0 and most of the chips sucked. Ford Motorsports made an extender that waas like $800 that you could play with your fuel tables and such. I'm not sure if they still do it or not. I think the best bet would be a Dyno tune
I haven't played with a 5.0 in a few yearsa but I've done the Edelbrock, GT40, Cobra and Trick Flow intakes (all street versions). I like the Trick Flow the most for looks and I have to say the Edelbrock seemed to flow the best. The GT40 looks cool too but can't be ported while the Cobra has lots of room to be Extrude Honed. It's really a matter of personal taste and runner length. There are some really extreme short runner versions out there that flow great at high RPM but lose low RMP velocity and sacrafice torque. I've seen a new BBK intake out that looks totally different than the typical design. I've always liked BBK's products and fit and the design is worth looking at.
Unless you're going to run an FMU with the 24s, I would go with the 32s. With high flowing heads and a SC, you'll want the extra capacity of the larger injectors... That's just my free 2 cents
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